Professor of Biology
Postdoctoral Research Associate, University of Notre Dame (2001-2005)
Kansas State University, Ph.D. (2001)
Marian College, B.S.
Our laboratory examines the effects of anthropogenic activities on freshwater ecosystems. We quantify the movement of inorganic and organic contaminants from urban and agricultural activities as it is degraded and/or exported downstream. Additionally, we quantify the effects of these contaminants on aquatic organisms across trophic levels and evaluate the role of microbial dynamics in contaminant transport.
Specific Goal: Develop predictive models of contaminant abundance and effects on aquatic organisms to aid management of freshwater ecosystems.
In our research, we:
- Quantify transport metrics of inorganic and organic compounds
- Measure potential for microbial degradation of compounds under variable physicochemical characteristics
- Assess toxicity of contaminants on aquatic organisms using non-lethal endpoints such as growth and fecundity
Bernot, MJ, RJ Bernot, CD Matthaei. 2018. Emerging organic contaminants (EOCs) in freshwaters in Dunedin, New Zealand. https://doi.or/10.1080/00288330.2018.1457062
Elias, D, MJ Bernot. 2017. Pesticide and nitrate transport in an agriculturally influenced stream in Indiana. Environmental Monitoring and Assessment 189:162.
Elias, D, MJ Bernot. 2017. Effects of individual and combined pesticide commercial formulations exposure to egestion and movement of common freshwater snails, Physa acuta and Helisoma anceps. American Midland Naturalist 178:97-111.
Bernot, MJ, JC Becker, J Doll, TE Lauer. 2016. A national reconnaissance of trace organic compounds (TOCs) in United States lotic ecosystems. Science of the Total Environment 572:422-433.
Madinger, H, B Goldman, K Wilson, MJ Bernot. 2016. Biogeochemistry and nutrient limitation of microbial biofilms in Devils Hole, Nevada. Western North American Naturalist 76(1): 53-71.
Wyatt, K, J Bange, A Fitzgibbon, MJ Bernot, A Rober. 2015. Nutrients and temperature interact to regulate algae and heterotrophic bacteria in an Alaskan poor fen peatland. Canadian Journal of Fisheries and Aquatic Sciences 72:447-453.
Osborne, R, MJ Bernot, S Findlay. 2015. Changes in nitrogen cycling processes along a salinity gradient in tidal wetlands of the Hudson River, New York, USA. Wetlands 35:323-334.
Bernot, MJ, JR Justice. 2014. Survey of PCPs in the US. In: The Handbook of Environmental Chemistry: Personal Care Products in the Aquatic Environment. S Diaz Cruz and D Barcelo (Eds). Springer.
Jarvis, AL, MJ Bernot, RJ Bernot. 2014. The effects of the pharmaceutical carbamazepine on life history characteristics of flat-headed mayflies (Heptageniidae) and aquatic resource interactions. Ecotoxicology 23:1701-12.
Jarvis, AL, MJ Bernot, RJ Bernot. 2014. Relationships between the psychiatric drug carbamazepine and freshwater macroinvertebrate community structure. Science of the Total Environment 496:499-509.
Jarvis, AL, MJ Bernot, RJ Bernot. 2014. The effects of the drug carbamazepine on freshwater invertebrate communities and ecosystem dynamics. Science of the Total Environment 496:461-470.
Jacquemin, SJ, LK Smelser, MJ Bernot. 2014. Twitter in the Higher Education classroom: A student and faculty assessment of use and perception. Journal of College Science and Teaching 43(6).
Bernot, MJ, J Metzler. 2014. A comparative study of instructor- and student-led learning in a large nonmajors Biology course: Student performance and perceptions. Journal of College Science and Teaching 44(1):58-65.
Johnson, LT, JL Tank, RO Hall, PJ Mulholland, SK Hamilton, HM Valett, JR Webster, MJ Bernot, WH McDowell, BJ Peterson, SM Thomas. 2013. Quantifying the production of dissolved organic nitrogen in headwater streams using 15N tracer additions. Limnology and Oceanography 58(4):1271-1285.
Ferguson, PJ, MJ Bernot, JC Doll, TE Lauer. 2013. Detection of pharmaceuticals and personal care products (PPCPs) in near-shore habitats of southern Lake Michigan. Science of the Total Environment 458-460:187-196.
Bernot, MJ, L Smith, J Frey. 2013. Human and veterinary pharmaceutical abundance and transport in rural central Indiana streams influenced by confined animal feeding operations (CAFOs). Science of the Total Environment 445-446:219-230.
Bernot, MJ, KP Wilson. 2012. Spatial and temporal variation of dissolved oxygen and ecosystem energetics in Devils Hole, Nevada. Western North American Naturalist 72(3):262-275.
Raffel, AE, C Olinger, MJ Bernot. 2012. Occurrence of herbicides in central Indiana streams. Proceeding of the Indiana Academy of Science 120(1-2).
Denton, R, MJ Bernot. 2012. Effects of multiple agricultural chemicals on northern leopard frog, Lithobates pipiens, larvae. Proceedings of the Indiana Academy of Sciences 120(1-2).
Brown, J, MJ Bernot, RJ Bernot. 2012. The influence of TCS on the growth and behavior of the freshwater snail, Physa acuta. Journal of Environmental Science and Health, Part A: Toxic/Hazardous Substances and Environmental Engineering 47(11):1626-1630.
Bunch, ND, MJ Bernot. 2012. Nitrate and ammonium uptake by natural stream sediment microbial communities in response to nutrient enrichment. Research in Microbiology 163:137-141.
Veach, A, MJ Bernot, J Mitchell. 2012. The influence of six pharmaceuticals on freshwater sediment microbial growth incubated under variable temperatures and UV exposure. Biodegradation 23(4):497-507.
Veach, A, MJ Bernot. 2011. Temporal variation of pharmaceuticals in an urban and agriculturally influenced stream. Science of the Total Environment 409(21):4553-4563.
Bunch, AR, MJ Bernot. 2011. Pharmaceutical abundance in central Indiana streams and effects on microbial activity. EcoToxicology 20:97-109.
Beaulieu, JJ, JL Tank, SK Hamilton, WM Wollheim, RO Hall, PJ Mulholland, BJ Peterson, LR Ashkenas, LW Cooper, CN Dahm, WK Dodds, NB Grimm, SL Johnson, WH McDowell, GC Poole, HM Valett, CP Arango, MJ Bernot, AJ Burgin, CL Crenshaw, AM Helton, LT Johnson, JM O'Brien, JD Potter, RW Sheibley, DJ Sobota, SM Thomas. 2010. Nitrous oxide emission from denitrification in stream and river networks. Proceedings of the National Academy of Science. December doi: 10.1073/pnas.1011464108.
Findlay, SEG, PJ Mulholland, SK Hamilton, JL Tank, MJ Bernot, AJ Burgin, CL Crenshaw, WK Dodds, NB Grimm, WH McDowell, JD Potter, DJ Sobota. 2011. Cross-stream comparison of substrate-specific denitrification potential. Biogeochemistry 104(1-3):381-392
Bernot, MJ, M Calkins, Bernot, RJ, M Hunt. 2011. The influence of different urban pavements on water quality. International Journal of Road Materials and Pavement Design 12-1/2011.
Bernot, MJ, EC Martin, RJ Bernot. 2010. The influence of trophic complexity on preferential uptake of dissolved inorganic and organic nitrogen: a laboratory microcosm experiment. Journal of the North American Biological Society 29:1199-1211.
Bernot, MJ, DJ Sobota, PJ Mulholland, RO Hall, WK Dodds, JR Webster, JL Tank, LR Ashkenas, LW Cooper, CN Dahm, SV Gregory, NB Grimm, SK Hamilton, SL Johnson, WH McDowell, JL Meyer, B Peterson, GC Poole, HM Valett, C Arango, JJ Beaulieu, AJ Burgin, C Crenshaw, AM Helton, L Johnson, J Merriam, BR Niederlehner, JM O'brien, JD Potter, RW Sheibley, SM Thomas, K Wilson. 2010. Inter-regional comparison of land-use effects on stream metabolism. Freshwater Biology 55:1874-1890.
Mulholland, PJ, RO Hall, DJ Sobota, WK Dodds, SEG Findlay, NB Grimm, SK Hamilton, WH McDowell, JM O’Brien, JL Tank, LR Ashkenas, LW Cooper, CN Dahm, SV Gregory, SL Johnson, JL Meyer, BJ Peterson, GC Poole, HM Valett, JR Webster, CP Arango, JJ Beaulieu, MJ Bernot, AJ Burgin, CL Crenshaw, AM Helton, LT Johnson, BR Niederlehner, JD Potter, RW Sheibley, SM Thomas. 2009. Nitrate removal in stream ecosystems measured by 15N addition experiments: Denitrification. Limnology and Oceanography 54:640-652.
Hall, RO, JL Tank, DJ Sobota, PJ Mulholland, JM O’Brien, WK Dodds, JR Webster, HM Valett, GC Poole, BJ Peterson, JL Meyer, WH McDowell, SL Johnson, SK Hamilton, NB Grimm, SV Gregory, CN Dahm, LW Cooper, LR Ashkenas, SM Thomas, RW Sheibley, JD Potter, BR Neiderlehner, LT Johnson, AM Helton, CM Crenshaw, AJ Burgin, MJ Bernot, JJ Beuaulieu, CP Arango. 2009. Nitrate removal in stream ecosystems measured by 15N addition experiments: Total uptake. Limnology and Oceanography 54:653-665.
Bernot, MJ, RJ Bernot, JT Morris. 2008. Nutrient cycling relative to 15N and 13C natural abundance in a coastal wetland with long-term nutrient additions. Aquatic Ecology.
Mulholland, PJ, AM Helton, GC Poole, RO Hall, SK Hamilton, BJ Peterson, JL Tank, LR Ashkenas, LW Cooper, CN Dahm, WK Dodds, S Findlay, SV Gregory, NB Grimm, SL Johnson, WH McDowell, JL Meyer, HM Valett, JR Webster, C Arango, JJ Beaulieu, MJ Bernot, AJ Burgin, C Crenshaw, L Johnson, BR Niderlehner, JM O’Brien, JD Potter, RW Sheibely, DJ Sobota, SM Thomas. 2008. Excess nitrate from agricultural and urban areas reduces denitrification efficiency in streams. Nature. 452:202-206.
Bruesewitz DA, JL Tank, & MJ Bernot. 2008. Delineating the effects of zebra mussels (Dreissena polymorpha) on N transformation rates using laboratory mesocosms. Journal of the North American Benthological Society 27(2):236-251.
Arango CP, JL Tank, JL Schaller, & TV Royer, MJ Bernot, MB David. 2007 Benthic organic carbon influences denitrification in streams with high nitrate concentration. Freshwater Biology 52(7):1210-1222.
Inwood SE, JL Tank, & MJ Bernot. 2007. Factors controlling sediment denitrification in Midwestern streams of varying land use. Microbial Ecology 53(2):247-258.
Bruesewitz DA, JL Tank, MJ Bernot, WB Richardson, & EA Strauss. 2006. Seasonal effects of zebra mussel (Dreissena polymorpha) on sediment denitrification rates in Pool 8 of the Upper Mississippi River. Canadian Journal of Fisheries and Aquatic Sciences 63(5):957-969.
Bernot MJ, JL Tank, TB Royer, & MB David. 2006. Nutrient processing in streams draining agricultural watersheds of the Midwestern U.S. Freshwater Biology 51:499-509.
Tank JL, MJ Bernot, & EJ Rosi-Marshall. 2006. Nitrogen limitation, uptake, and turnover in stream ecosystems. In: Methods in Stream Ecology, FR Hauer and GA Lamberti (editors), 2nd edition. Academic Press.
Wall LG, JL Tank, TV Royer, & MJ Bernot. 2005. Denitrification in a Midwestern agriculturally-influenced reservoir. Biogeochemistry 76:85-111.
Inwood SE, JL Tank, & MJ Bernot. 2005. The influence of land use on sediment denitrification rates in nine headwater streams within the Kalamazoo River Basin, USA. Journal of the North American Benthological Society. 24(2):227-245
Bernot MJ & WK Dodds. 2005. Nitrogen retention, removal, and saturation in lotic ecosystems. Ecosystems 8:442-453.
Bernot MJ, WK Dodds, WS Gardner, MJ McCarthy, D Sobolev, & JL Tank. 2003. Comparing denitrification estimates using acetylene inhibition and membrane inlet mass spectrometry methods. Applied and Environmental Microbiology. 69:5950-5956.
Kemp MJ & WK Dodds. 2002. Comparisons of nitrification and denitrification in pristine and agriculturally influenced streams. Ecological Applications 12(4):998-1009.
Kemp MJ & WK Dodds. 2002. The influence of variable ammonium, nitrate, and oxygen concentrations on uptake, nitrification, and denitrification rates. Limnology and Oceanography 47(5):1380-1393.
Kemp MJ & Dodds. 2001. Spatial and temporal patterns of nitrogen in pristine and agriculturally influenced streams. Biogeochemistry. 53(2):125-141.
Kemp MJ & WK Dodds. 2001. Centimeter-scale patterns of dissolved oxygen concentrations and nitrification rates in prairie stream substrata. Journal of the North American Benthological Society 20:347-357.
Dodds WK, MA Evans-White, NM Gerlanc, L Gray, DA Gudder, MJ Kemp, AL Lopez, D Stagliano, EA Strauss, JL Tank, MR Whiles, & WM Wolheim. 2000. Quantification of the nitrogen cycle in a prairie stream. Ecosystems 3:574-589.